Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sdc1P18828 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm25614-201ENSMUST00000104013 133 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm25415-201ENSMUST00000104220 132 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm26014-201ENSMUST00000104405 132 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm13414-201ENSMUST00000117516 727 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm14865-201ENSMUST00000117523 494 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm14480-201ENSMUST00000118521 433 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm11370-201ENSMUST00000120583 260 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm22206-201ENSMUST00000158612 116 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm28186-201ENSMUST00000187447 679 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm37581-201ENSMUST00000192371 988 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm43744-201ENSMUST00000196387 688 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm42696-201ENSMUST00000199859 1142 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 AC102582.1-201ENSMUST00000215376 378 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 AC158531.2-201ENSMUST00000224264 473 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 AC140208.1-201ENSMUST00000226609 285 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 AC124715.1-201ENSMUST00000228480 754 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sdc1P18828 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm20900-201ENSMUST00000078729 472 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 AC159624.1-201ENSMUST00000217762 1344 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm23294-201ENSMUST00000104150 164 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm13798-201ENSMUST00000118285 139 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm14729-201ENSMUST00000118373 689 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm15665-201ENSMUST00000119116 847 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm11295-201ENSMUST00000121379 803 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm13440-201ENSMUST00000121665 496 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm15242-201ENSMUST00000122459 283 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm16284-201ENSMUST00000140995 400 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm23553-201ENSMUST00000157817 295 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm20430-201ENSMUST00000172474 207 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm23639-201ENSMUST00000175078 132 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC5.07□□□□□ -1.6
Sdc1P18828 Mir6974-201ENSMUST00000184381 83 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm28645-201ENSMUST00000185859 564 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm18849-201ENSMUST00000189861 560 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm37375-201ENSMUST00000193859 387 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm37901-201ENSMUST00000195107 514 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm37385-201ENSMUST00000195223 387 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm42776-201ENSMUST00000198031 406 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm19104-201ENSMUST00000198392 679 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms