Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm9517-201ENSMUST00000195021 874 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm18600-201ENSMUST00000207205 505 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Pramel-201ENSMUST00000118979 1383 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm23884-201ENSMUST00000122687 294 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm11545-201ENSMUST00000146507 375 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm46364-201ENSMUST00000218548 319 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Chmp6P0C0A3 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms