Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm38121-201ENSMUST00000193213 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm38035-201ENSMUST00000194427 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm38350-201ENSMUST00000194789 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm37990-201ENSMUST00000195821 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm43390-201ENSMUST00000196614 421 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm6070-201ENSMUST00000207275 419 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC5.11□□□□□ -1.59
Hmgb3O54879 CT009546.3-201ENSMUST00000220914 208 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 n-R5s169-201ENSMUST00000083110 120 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Hmgb3O54879 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm44289-201ENSMUST00000204144 1390 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm24173-201ENSMUST00000104130 128 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm26016-201ENSMUST00000104403 129 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm14356-201ENSMUST00000118322 869 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm14353-201ENSMUST00000122200 869 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Hmgb3O54879 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Mir1231-201ENSMUST00000175639 81 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm5283-201ENSMUST00000177874 334 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm18349-201ENSMUST00000187440 904 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Ighv1-38-201ENSMUST00000192755 349 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm36965-201ENSMUST00000193797 394 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm42752-201ENSMUST00000198394 1106 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm7452-201ENSMUST00000200764 788 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm18907-201ENSMUST00000209719 932 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm45657-201ENSMUST00000211318 1349 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 AC160112.1-201ENSMUST00000219139 714 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC5.1□□□□□ -1.59
Hmgb3O54879 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.1□□□□□ -1.59
Hmgb3O54879 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hmgb3O54879 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm15310-201ENSMUST00000117891 372 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm12361-201ENSMUST00000119806 1044 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm12903-201ENSMUST00000121015 544 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm22276-201ENSMUST00000122469 129 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm22728-201ENSMUST00000158087 129 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm24359-201ENSMUST00000158418 221 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm23639-201ENSMUST00000175078 132 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm23810-201ENSMUST00000175150 74 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.09□□□□□ -1.59
Hmgb3O54879 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm20813-201ENSMUST00000186646 705 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm21923-201ENSMUST00000188455 696 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm18593-201ENSMUST00000200754 1139 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms