Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc180J3QNE4 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc180J3QNE4 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc180J3QNE4 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc180J3QNE4 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc180J3QNE4 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc180J3QNE4 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc180J3QNE4 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm14755-201ENSMUST00000118037 384 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm19182-201ENSMUST00000207139 577 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 AC116319.2-201ENSMUST00000228159 984 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm5830-201ENSMUST00000049117 443 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm14900-201ENSMUST00000120304 733 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm5809-201ENSMUST00000121854 529 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 AC122371.2-201ENSMUST00000220583 366 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Gm37090-201ENSMUST00000195694 4105 ntBASIC11.59□□□□□ -0.55
Ccdc180J3QNE4 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccdc180J3QNE4 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 AC159006.2-201ENSMUST00000228734 4144 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm25057-201ENSMUST00000157366 88 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm24081-201ENSMUST00000175177 125 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Mir6337-201ENSMUST00000184194 105 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm37235-201ENSMUST00000195171 59 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm44382-201ENSMUST00000198683 122 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 AC133650.1-201ENSMUST00000217243 578 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Gm9930-201ENSMUST00000066742 3151 ntBASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc180J3QNE4 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm37142-201ENSMUST00000193718 3110 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm20486-201ENSMUST00000101544 128 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm23662-201ENSMUST00000158046 111 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm37265-201ENSMUST00000191698 885 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm19060-201ENSMUST00000201959 421 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm45724-201ENSMUST00000213031 420 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 AC156037.1-201ENSMUST00000221133 127 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 AC125543.3-201ENSMUST00000221991 126 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Mir298-201ENSMUST00000083476 82 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gm42837-201ENSMUST00000197071 2829 ntBASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc180J3QNE4 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Gm45876-201ENSMUST00000212698 2709 ntBASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Gm43857-201ENSMUST00000200343 3079 ntBASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Gm5073-201ENSMUST00000118222 820 ntBASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Gm27004-201ENSMUST00000183300 727 ntBASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccdc180J3QNE4 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms