Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm11498-201ENSMUST00000120660 949 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm26509-201ENSMUST00000180947 948 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm27970-201ENSMUST00000184854 407 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm37135-201ENSMUST00000192652 534 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm43215-201ENSMUST00000199108 252 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.35□□□□□ -1.55
Usf3B2RUQ2 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm11256-201ENSMUST00000118109 829 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm23674-201ENSMUST00000157473 131 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Mir1960-201ENSMUST00000157488 78 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm7745-201ENSMUST00000182235 973 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm8506-201ENSMUST00000186661 829 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm8581-201ENSMUST00000188636 890 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm45690-201ENSMUST00000210775 246 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm36501-201ENSMUST00000221857 745 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Gm10205-201ENSMUST00000087431 234 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Olfr687-201ENSMUST00000098154 938 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usf3B2RUQ2 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
Usf3B2RUQ2 Gm15078-201ENSMUST00000118371 782 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm13835-201ENSMUST00000118459 685 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm26023-201ENSMUST00000122722 313 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm15501-202ENSMUST00000140687 625 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Mir6348-201ENSMUST00000183804 120 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm18632-201ENSMUST00000222597 2087 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm12630-201ENSMUST00000121575 784 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm15959-201ENSMUST00000121724 368 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm22276-201ENSMUST00000122469 129 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm23426-201ENSMUST00000122483 318 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm23539-201ENSMUST00000157537 224 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm9064-201ENSMUST00000163579 566 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm20397-201ENSMUST00000174520 362 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm27005-201ENSMUST00000182783 921 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm37103-201ENSMUST00000191830 115 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gm18409-202ENSMUST00000220105 529 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Olfr467-201ENSMUST00000084756 927 ntBASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usf3B2RUQ2 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms