Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm16276-201ENSMUST00000131218 262 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm37410-201ENSMUST00000193623 3039 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm25487-201ENSMUST00000158725 125 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm18833-201ENSMUST00000173218 862 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Mir3095-201ENSMUST00000175552 87 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm6931-201ENSMUST00000183103 371 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm18839-201ENSMUST00000204292 670 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm18838-201ENSMUST00000204855 886 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm44705-201ENSMUST00000206719 339 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm7731-201ENSMUST00000091759 470 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm42490-201ENSMUST00000198595 2064 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a4A2AX52 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Thap6-201ENSMUST00000191860 3151 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.37□□□□□ -1.55
Col6a4A2AX52 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a4A2AX52 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm24719-201ENSMUST00000157520 110 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm23894-201ENSMUST00000158107 313 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm20691-201ENSMUST00000176889 333 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm28847-201ENSMUST00000186778 700 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm28467-201ENSMUST00000190981 318 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm36262-201ENSMUST00000223274 499 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm23330-201ENSMUST00000082660 164 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms