Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm12504-202ENSMUST00000148026 306 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm25435-201ENSMUST00000158277 267 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm20691-201ENSMUST00000176889 333 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Mir6337-201ENSMUST00000184194 105 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm27295-201ENSMUST00000184264 153 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm17918-201ENSMUST00000205315 574 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm5928-201ENSMUST00000221839 466 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm23238-201ENSMUST00000083007 164 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 AU020206-202ENSMUST00000206358 3009 ntBASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim3Q9R1R2 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm12842-201ENSMUST00000117298 476 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm24781-201ENSMUST00000157636 117 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm8550-201ENSMUST00000161621 653 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm23968-201ENSMUST00000175047 125 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm27152-201ENSMUST00000183828 99 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm27299-201ENSMUST00000184593 103 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm28620-201ENSMUST00000190463 439 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm5027-201ENSMUST00000206700 375 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm6575-201ENSMUST00000222946 697 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm5321-201ENSMUST00000072050 447 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Mir412-201ENSMUST00000083636 80 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim3Q9R1R2 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms