Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm18700-201ENSMUST00000185791 553 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm43354-201ENSMUST00000196862 346 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm17824-201ENSMUST00000197690 805 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm10108-201ENSMUST00000078246 319 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Upk3aQ9JKX8 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm12653-201ENSMUST00000117778 561 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm12929-201ENSMUST00000122406 370 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm26046-201ENSMUST00000157312 166 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm38237-201ENSMUST00000193366 376 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm38291-201ENSMUST00000193671 259 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm37477-201ENSMUST00000195215 884 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm43048-201ENSMUST00000196101 388 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm45448-201ENSMUST00000211739 209 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms