Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm28739-201ENSMUST00000185415 696 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm29259-201ENSMUST00000186396 694 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28949-201ENSMUST00000187805 696 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm21803-201ENSMUST00000188897 693 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28483-201ENSMUST00000189519 696 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28567-201ENSMUST00000190270 693 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm32347-201ENSMUST00000192944 696 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm37044-201ENSMUST00000193531 693 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm7804-202ENSMUST00000194187 854 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm38369-201ENSMUST00000195101 693 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm43007-201ENSMUST00000197618 291 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm9245-201ENSMUST00000200528 983 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm33626-201ENSMUST00000206790 828 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm44654-201ENSMUST00000208052 329 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm17995-201ENSMUST00000209266 530 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm4800-201ENSMUST00000215776 1266 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm29809-201ENSMUST00000218423 493 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC167977.1-201ENSMUST00000221384 234 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC164424.1-201ENSMUST00000221690 170 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC125019.1-201ENSMUST00000224809 908 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm2531-201ENSMUST00000075609 512 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm14442-201ENSMUST00000119690 1736 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm8734-201ENSMUST00000211669 1312 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 n-R5s1-201ENSMUST00000101925 119 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm22927-201ENSMUST00000104268 131 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm7834-201ENSMUST00000117560 437 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm14630-201ENSMUST00000118057 246 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm7309-201ENSMUST00000121670 581 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm6689-201ENSMUST00000130905 481 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm24347-201ENSMUST00000158711 142 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm29168-201ENSMUST00000189953 687 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Mir7230-201ENSMUST00000195977 56 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm43350-201ENSMUST00000196382 711 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm43228-201ENSMUST00000200735 264 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm2566-201ENSMUST00000201267 431 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm9689-201ENSMUST00000210009 428 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Trim39Q9ESN2 AC133283.1-201ENSMUST00000228443 859 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms