Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
Ube3bQ9ES34 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ube3bQ9ES34 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Ube3bQ9ES34 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC8.85□□□□□ -0.99
Ube3bQ9ES34 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ube3bQ9ES34 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm13545-201ENSMUST00000119044 482 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm13815-201ENSMUST00000119963 412 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm5255-201ENSMUST00000120125 642 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm23034-201ENSMUST00000158001 147 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm21729-201ENSMUST00000180058 664 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm21853-201ENSMUST00000180071 664 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm9274-201ENSMUST00000182505 984 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm18501-201ENSMUST00000185363 664 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm28958-201ENSMUST00000185864 703 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm29495-201ENSMUST00000189319 664 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm37288-201ENSMUST00000193963 334 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 CU024910.1-201ENSMUST00000214310 418 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 CT030194.2-201ENSMUST00000225752 379 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm6863-201ENSMUST00000052882 636 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Olfr683-201ENSMUST00000061284 960 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm10115-201ENSMUST00000076071 1228 ntBASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Ube3bQ9ES34 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
Ube3bQ9ES34 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ube3bQ9ES34 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.84□□□□□ -1
Ube3bQ9ES34 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm5182-201ENSMUST00000217708 6092 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm22438-201ENSMUST00000104049 132 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm15576-201ENSMUST00000117806 583 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm13771-201ENSMUST00000117988 238 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm11321-201ENSMUST00000121257 902 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm11263-201ENSMUST00000121853 749 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm23379-201ENSMUST00000180026 107 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms