Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp2aQ9DB34 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm12653-201ENSMUST00000117778 561 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm13183-201ENSMUST00000118615 789 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm11318-201ENSMUST00000118640 961 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm15181-201ENSMUST00000120142 177 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm44374-201ENSMUST00000199821 140 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Gm9788-201ENSMUST00000057038 906 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Chmp2aQ9DB34 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm12565-201ENSMUST00000119004 649 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Mir1907-201ENSMUST00000122509 90 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm22223-201ENSMUST00000157360 125 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm26353-201ENSMUST00000158224 255 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm23259-201ENSMUST00000158318 303 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm18808-201ENSMUST00000173316 462 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm28195-201ENSMUST00000186992 372 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm19340-201ENSMUST00000221995 345 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Gm18955-201ENSMUST00000223173 649 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp2aQ9DB34 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms