Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm22702-201ENSMUST00000175372 69 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm27299-201ENSMUST00000184593 103 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Mir8105-201ENSMUST00000184718 89 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm29778-201ENSMUST00000201667 466 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm44411-201ENSMUST00000204172 349 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm45070-201ENSMUST00000208100 246 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm5321-201ENSMUST00000072050 447 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Use1Q9CQ56 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Use1Q9CQ56 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.02□□□□□ -1.45
Use1Q9CQ56 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm11504-201ENSMUST00000120211 173 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm8550-201ENSMUST00000161621 653 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm7418-201ENSMUST00000162120 801 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Mir6367-201ENSMUST00000183385 102 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Mir7033-201ENSMUST00000184259 81 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm18447-201ENSMUST00000187501 307 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm29214-201ENSMUST00000190216 570 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm32983-201ENSMUST00000208500 505 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm2754-201ENSMUST00000223383 589 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.01□□□□□ -1.45
Use1Q9CQ56 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Use1Q9CQ56 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Use1Q9CQ56 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms