Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.84□□□□□ -1.31
Nkx6-1Q99MA9 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Nkx6-1Q99MA9 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Nkx6-1Q99MA9 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Nkx6-1Q99MA9 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.32
Nkx6-1Q99MA9 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm43917-201ENSMUST00000191984 2360 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC164883.2-201ENSMUST00000227931 3815 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm37499-201ENSMUST00000194683 3478 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC130219.1-201ENSMUST00000228406 3433 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm11105-201ENSMUST00000112781 478 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm14786-201ENSMUST00000117127 944 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm11445-201ENSMUST00000119101 532 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm12825-201ENSMUST00000120249 563 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm14787-201ENSMUST00000121236 388 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm23046-201ENSMUST00000158369 284 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Ear-ps10-201ENSMUST00000161871 460 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm17194-201ENSMUST00000164610 348 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm21772-201ENSMUST00000169213 478 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm17126-201ENSMUST00000172276 523 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Mir3085-201ENSMUST00000175493 89 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm23187-201ENSMUST00000175746 86 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm20702-201ENSMUST00000176181 460 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm26991-201ENSMUST00000180950 620 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm28885-201ENSMUST00000185615 563 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm37433-201ENSMUST00000192695 678 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm36638-201ENSMUST00000193295 400 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm37441-201ENSMUST00000194430 678 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm35212-201ENSMUST00000196672 606 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm9240-201ENSMUST00000206527 742 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Nkx6-1Q99MA9 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm42700-201ENSMUST00000199071 2437 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms