Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm11689-201ENSMUST00000120766 302 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm27299-201ENSMUST00000184593 103 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm18447-201ENSMUST00000187501 307 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm21577-201ENSMUST00000190823 697 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm19092-201ENSMUST00000209036 969 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lsm1Q8VC85 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm14733-201ENSMUST00000117680 133 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm14356-201ENSMUST00000118322 869 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm11504-201ENSMUST00000120211 173 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm14353-201ENSMUST00000122200 869 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm12778-201ENSMUST00000122341 333 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm26037-201ENSMUST00000158150 311 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm28023-201ENSMUST00000184556 60 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm27825-201ENSMUST00000184586 60 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm29383-201ENSMUST00000188284 480 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm17895-201ENSMUST00000194028 874 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm7452-201ENSMUST00000200764 788 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm4585-201ENSMUST00000207218 452 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm2996-201ENSMUST00000211398 537 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lsm1Q8VC85 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 260.1 ms