Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm5387-201ENSMUST00000119776 857 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm16511-201ENSMUST00000120019 564 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm27853-201ENSMUST00000184176 250 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm19030-201ENSMUST00000194947 552 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm44849-201ENSMUST00000207595 484 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm7780-201ENSMUST00000214787 406 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm19073-201ENSMUST00000219978 555 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 AC154828.2-201ENSMUST00000220908 1070 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm15732-201ENSMUST00000079794 480 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm23238-201ENSMUST00000083007 164 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm13768-201ENSMUST00000116469 929 ntBASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.75□□□□□ -1.17
Brf1Q8CFK2 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm36994-201ENSMUST00000192941 492 ntBASIC7.75□□□□□ -1.17
Brf1Q8CFK2 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm7554-201ENSMUST00000202282 574 ntBASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.75□□□□□ -1.17
Brf1Q8CFK2 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Brf1Q8CFK2 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm11799-201ENSMUST00000116110 460 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm12874-201ENSMUST00000117190 913 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm14755-201ENSMUST00000118037 384 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm11976-201ENSMUST00000119236 295 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm11370-201ENSMUST00000120583 260 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm7212-201ENSMUST00000120817 348 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm37103-201ENSMUST00000191830 115 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm42708-201ENSMUST00000196332 905 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 AC161250.1-201ENSMUST00000213426 1111 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm18329-201ENSMUST00000215832 589 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms