Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm23894-201ENSMUST00000158107 313 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm18781-201ENSMUST00000211252 924 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm42898-201ENSMUST00000200370 3073 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm24741-201ENSMUST00000158857 106 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Mir3095-201ENSMUST00000175552 87 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm6472-201ENSMUST00000178147 651 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm26923-201ENSMUST00000182615 996 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm7337-202ENSMUST00000181439 2655 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm10693-201ENSMUST00000144146 2037 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a6Q8C6K9 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm14335-201ENSMUST00000119165 810 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm13533-201ENSMUST00000121104 177 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms