Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm37570-201ENSMUST00000195411 3106 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l9-201ENSMUST00000101891 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26504-201ENSMUST00000102033 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm11880-201ENSMUST00000117612 399 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm13771-201ENSMUST00000117988 238 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm14158-201ENSMUST00000118409 308 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm12844-201ENSMUST00000119463 582 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm15081-201ENSMUST00000119794 844 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm11876-201ENSMUST00000120002 269 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25808-201ENSMUST00000122784 284 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm15508-201ENSMUST00000160330 325 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22258-201ENSMUST00000177645 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26502-201ENSMUST00000177732 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l13-201ENSMUST00000177737 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25350-201ENSMUST00000177849 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l15-201ENSMUST00000177940 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm23446-201ENSMUST00000177977 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l4-201ENSMUST00000177982 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26201-201ENSMUST00000178047 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm24711-201ENSMUST00000178062 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm24609-201ENSMUST00000178166 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm23265-201ENSMUST00000178321 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22812-201ENSMUST00000178329 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l3-201ENSMUST00000178370 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26246-201ENSMUST00000178388 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22131-201ENSMUST00000178415 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25155-201ENSMUST00000178450 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm24760-201ENSMUST00000178530 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26032-201ENSMUST00000178535 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22285-201ENSMUST00000178576 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22776-201ENSMUST00000178634 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22417-201ENSMUST00000178656 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l2-201ENSMUST00000178675 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26270-201ENSMUST00000178690 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l16-201ENSMUST00000178777 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25074-201ENSMUST00000178782 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25210-201ENSMUST00000178813 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25157-201ENSMUST00000178914 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm23313-201ENSMUST00000178931 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l17-201ENSMUST00000178936 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm23089-201ENSMUST00000178947 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22046-201ENSMUST00000179027 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l10-201ENSMUST00000179053 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26365-201ENSMUST00000179177 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm23767-201ENSMUST00000179278 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm24153-201ENSMUST00000179280 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25597-201ENSMUST00000179388 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l1-201ENSMUST00000179518 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22941-201ENSMUST00000179630 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22631-201ENSMUST00000179656 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25816-201ENSMUST00000179764 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l12-201ENSMUST00000179816 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l14-201ENSMUST00000179875 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l8-201ENSMUST00000179889 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l7-201ENSMUST00000179895 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l5-201ENSMUST00000179927 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l6-201ENSMUST00000179955 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26188-201ENSMUST00000179963 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm25471-201ENSMUST00000180126 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm26433-201ENSMUST00000180227 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Snord116l11-201ENSMUST00000180312 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm23862-201ENSMUST00000180342 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm22128-201ENSMUST00000180346 94 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms