Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Gm44075-201ENSMUST00000204208 216 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Gm5374-202ENSMUST00000222910 314 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Trub1Q8C0D0 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm25374-201ENSMUST00000158158 101 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm6264-201ENSMUST00000160802 624 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Mir5107-201ENSMUST00000175586 88 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm27005-201ENSMUST00000182783 921 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm44243-201ENSMUST00000204323 692 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trub1Q8C0D0 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm12094-201ENSMUST00000121781 472 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm16298-201ENSMUST00000161107 420 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm16297-201ENSMUST00000161466 459 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms