Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm22256-201ENSMUST00000102291 107 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm11517-201ENSMUST00000119491 387 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm12174-201ENSMUST00000119853 813 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm4992-201ENSMUST00000120256 768 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm25556-201ENSMUST00000158077 144 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm28846-201ENSMUST00000189161 368 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm28620-201ENSMUST00000190463 439 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm43546-201ENSMUST00000196721 943 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm42713-201ENSMUST00000202709 945 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm18838-201ENSMUST00000204855 886 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm45136-201ENSMUST00000205793 943 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm4042-201ENSMUST00000216946 637 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm5341-201ENSMUST00000058881 489 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Mir106b-201ENSMUST00000083580 82 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Mir711-201ENSMUST00000102188 82 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm13469-201ENSMUST00000118231 350 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm14614-201ENSMUST00000119873 384 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm13877-201ENSMUST00000120614 417 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm5456-201ENSMUST00000170706 844 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm17045-201ENSMUST00000178600 844 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm9274-201ENSMUST00000182505 984 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm28973-201ENSMUST00000189310 613 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm29160-201ENSMUST00000190094 699 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm17895-201ENSMUST00000194028 874 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm28392-201ENSMUST00000077630 393 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm23238-201ENSMUST00000083007 164 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc40Q8BI79 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms