Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm19030-201ENSMUST00000194947 552 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm38018-201ENSMUST00000195651 540 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm3544-201ENSMUST00000196129 305 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm19039-201ENSMUST00000204363 575 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm4510-201ENSMUST00000218265 427 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm42479-201ENSMUST00000198654 1356 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm11622-201ENSMUST00000120525 691 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Snora47-201ENSMUST00000157483 138 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm22210-201ENSMUST00000158101 144 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm27849-201ENSMUST00000183673 125 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm4332-201ENSMUST00000196114 346 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm7570-201ENSMUST00000215246 698 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm18899-201ENSMUST00000217663 546 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 AC154424.1-201ENSMUST00000225883 799 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx55Q6ZPL9 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm12442-201ENSMUST00000118372 338 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm15959-201ENSMUST00000121724 368 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm5401-201ENSMUST00000122444 365 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm23894-201ENSMUST00000158107 313 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm17063-201ENSMUST00000168135 456 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Mir3097-201ENSMUST00000175356 67 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Mir6952-201ENSMUST00000185092 61 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm44387-201ENSMUST00000196298 145 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 Gm17997-201ENSMUST00000211801 840 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 AC142113.2-201ENSMUST00000217425 748 ntBASIC7.5□□□□□ -1.21
Ddx55Q6ZPL9 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms