Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Gm15732-201ENSMUST00000079794 480 ntBASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp49Q6P9L4 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm25785-201ENSMUST00000104129 125 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm5793-201ENSMUST00000119393 630 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm9285-201ENSMUST00000177691 697 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm8480-201ENSMUST00000190350 698 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Gm18600-201ENSMUST00000207205 505 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Olfr687-201ENSMUST00000098154 938 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp49Q6P9L4 AC163296.2-201ENSMUST00000220177 1315 ntBASIC7.15□□□□□ -1.26
Usp49Q6P9L4 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Usp49Q6P9L4 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm14772-201ENSMUST00000116562 514 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm11987-201ENSMUST00000118524 381 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm16511-201ENSMUST00000120019 564 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm7212-201ENSMUST00000120817 348 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm13669-201ENSMUST00000122366 457 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm3140-201ENSMUST00000163523 481 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm26509-201ENSMUST00000180947 948 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm27602-201ENSMUST00000183861 111 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm37439-201ENSMUST00000193150 856 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm37186-201ENSMUST00000195629 2861 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp49Q6P9L4 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms