Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CiitaP79621 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.02□□□□□ -1.28
CiitaP79621 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.02□□□□□ -1.29
CiitaP79621 Gm24709-201ENSMUST00000104123 132 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm14018-201ENSMUST00000119042 455 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm14900-201ENSMUST00000120304 733 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm15618-201ENSMUST00000121610 452 ntBASIC7.02□□□□□ -1.29
CiitaP79621 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Gm5125-201ENSMUST00000148614 624 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm23958-201ENSMUST00000157207 105 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Mir1960-201ENSMUST00000157488 78 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm22548-201ENSMUST00000174899 78 ntBASIC7.02□□□□□ -1.29
CiitaP79621 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Mir7046-201ENSMUST00000183435 66 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Gm37177-201ENSMUST00000193768 417 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.02□□□□□ -1.29
CiitaP79621 Gm23011-202ENSMUST00000197855 275 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 Gm18103-201ENSMUST00000216621 779 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm9321-201ENSMUST00000221179 778 ntBASIC7.02□□□□□ -1.29
CiitaP79621 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm5374-202ENSMUST00000222910 314 ntBASIC7.02□□□□□ -1.29
CiitaP79621 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.02□□□□□ -1.29
CiitaP79621 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.02□□□□□ -1.29
CiitaP79621 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Gm22351-201ENSMUST00000083925 107 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CiitaP79621 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.02□□□□□ -1.29
CiitaP79621 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.02□□□□□ -1.29
CiitaP79621 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CiitaP79621 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.01□□□□□ -1.29
CiitaP79621 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Mir290a-201ENSMUST00000104627 83 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm15016-201ENSMUST00000117300 720 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm12442-201ENSMUST00000118372 338 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm11879-201ENSMUST00000121885 702 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm25660-201ENSMUST00000158470 104 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm23343-201ENSMUST00000158964 143 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm22094-201ENSMUST00000158976 117 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm27468-201ENSMUST00000183577 106 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Mir6244-201ENSMUST00000184156 117 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.01□□□□□ -1.29
CiitaP79621 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms