Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.34□□□□□ -1.39
Fdft1P53798 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Fdft1P53798 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Fdft1P53798 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.34□□□□□ -1.39
Fdft1P53798 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Fdft1P53798 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Fdft1P53798 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Rnu11-201ENSMUST00000104135 134 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm26422-201ENSMUST00000104276 132 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm16073-201ENSMUST00000116032 517 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm12937-201ENSMUST00000118333 448 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm15750-201ENSMUST00000120970 616 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm7613-201ENSMUST00000139070 487 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm23968-201ENSMUST00000175047 125 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm29156-201ENSMUST00000187764 499 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm37439-201ENSMUST00000193150 856 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm5853-201ENSMUST00000197183 632 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Gm43576-201ENSMUST00000197937 871 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm9267-201ENSMUST00000222831 404 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm24036-201ENSMUST00000082868 156 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.34□□□□□ -1.39
Fdft1P53798 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.34□□□□□ -1.39
Fdft1P53798 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Fdft1P53798 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
Fdft1P53798 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Fdft1P53798 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Fdft1P53798 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Fdft1P53798 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Fdft1P53798 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Fdft1P53798 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.33□□□□□ -1.4
Fdft1P53798 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Fdft1P53798 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Fdft1P53798 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Fdft1P53798 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Fdft1P53798 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.33□□□□□ -1.4
Fdft1P53798 Gm22710-201ENSMUST00000116892 125 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Gm14847-201ENSMUST00000121978 519 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Gm12175-201ENSMUST00000122081 345 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Fdft1P53798 Gm23762-201ENSMUST00000158348 106 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Fdft1P53798 Gm23632-201ENSMUST00000175289 125 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Gm9285-201ENSMUST00000177691 697 ntBASIC6.33□□□□□ -1.4
Fdft1P53798 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Fdft1P53798 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms