Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm3321-201ENSMUST00000200603 1129 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm45712-201ENSMUST00000212417 335 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Gm19709-201ENSMUST00000215403 482 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm18960-201ENSMUST00000222962 713 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Rfx1P48377 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Snora21-201ENSMUST00000082967 137 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm37621-201ENSMUST00000194716 5531 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm43528-201ENSMUST00000199492 1674 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
Rfx1P48377 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rfx1P48377 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm14786-201ENSMUST00000117127 944 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm12387-201ENSMUST00000118573 955 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm14985-201ENSMUST00000118693 786 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC8.31□□□□□ -1.08
Rfx1P48377 Mir1962-201ENSMUST00000157516 121 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm23822-201ENSMUST00000158739 128 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm16026-205ENSMUST00000162923 641 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Samd15-201ENSMUST00000169669 1194 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm7634-201ENSMUST00000185778 553 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm9541-201ENSMUST00000188409 502 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm29435-201ENSMUST00000191310 689 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm43582-201ENSMUST00000196149 343 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm9023-201ENSMUST00000198408 1038 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gm46231-201ENSMUST00000220152 314 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm5791-201ENSMUST00000220840 489 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Gm18338-201ENSMUST00000222381 560 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rfx1P48377 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rfx1P48377 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Rfx1P48377 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Rfx1P48377 AC154681.1-201ENSMUST00000225876 1735 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rfx1P48377 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.31□□□□□ -1.08
Rfx1P48377 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC8.31□□□□□ -1.08
Rfx1P48377 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rfx1P48377 Mir669l-201ENSMUST00000103771 98 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC8.3□□□□□ -1.08
Rfx1P48377 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm11880-201ENSMUST00000117612 399 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm5319-201ENSMUST00000118965 873 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm15030-201ENSMUST00000119804 484 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm11796-201ENSMUST00000120208 972 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm12297-201ENSMUST00000121380 979 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm24893-201ENSMUST00000122745 369 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms