Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx2P43241 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx2P43241 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx2P43241 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.17□□□□□ -1.42
Cdx2P43241 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx2P43241 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Cdx2P43241 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm24989-201ENSMUST00000104461 88 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm22103-201ENSMUST00000116733 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm26475-201ENSMUST00000116769 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm23620-201ENSMUST00000116812 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm25042-201ENSMUST00000116856 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm25540-201ENSMUST00000116880 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm14529-201ENSMUST00000117894 406 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm8317-201ENSMUST00000121261 471 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm5401-201ENSMUST00000122444 365 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm23259-201ENSMUST00000158318 303 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm26381-201ENSMUST00000174895 92 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Mir3097-201ENSMUST00000175356 67 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm23550-201ENSMUST00000179003 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm25123-201ENSMUST00000179154 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm25353-201ENSMUST00000179366 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm22992-201ENSMUST00000179496 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm25892-201ENSMUST00000179867 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm24092-201ENSMUST00000180257 121 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 Mir7008-201ENSMUST00000184398 63 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm18592-201ENSMUST00000221529 276 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.16□□□□□ -1.42
Cdx2P43241 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdx2P43241 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx2P43241 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.16□□□□□ -1.42
Cdx2P43241 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx2P43241 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cdx2P43241 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm11848-201ENSMUST00000121207 973 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm13430-201ENSMUST00000121366 288 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm15959-201ENSMUST00000121724 368 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm26923-201ENSMUST00000182615 996 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm27970-201ENSMUST00000184854 407 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm21728-201ENSMUST00000188442 695 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm21889-201ENSMUST00000188487 695 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm20932-201ENSMUST00000189115 694 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm21920-201ENSMUST00000190042 695 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 168.5 ms