Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm45657-201ENSMUST00000211318 1349 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm11858-201ENSMUST00000117935 838 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm11617-201ENSMUST00000119609 639 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm11850-201ENSMUST00000119679 479 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm15644-201ENSMUST00000121764 387 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm14990-201ENSMUST00000122354 445 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm22552-201ENSMUST00000157796 337 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm5611-201ENSMUST00000164523 852 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm29354-201ENSMUST00000187613 696 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm29464-201ENSMUST00000187692 513 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm38030-201ENSMUST00000192376 475 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm37017-201ENSMUST00000195266 747 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm42734-201ENSMUST00000201656 878 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm4548-201ENSMUST00000208487 509 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Gm19324-201ENSMUST00000213229 1169 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdx1P18111 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC5.29□□□□□ -1.56
Cdx1P18111 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdx1P18111 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdx1P18111 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cdx1P18111 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm13423-201ENSMUST00000117205 888 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm14893-201ENSMUST00000117904 282 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm14769-201ENSMUST00000118590 432 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm12944-201ENSMUST00000119262 463 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm13900-201ENSMUST00000119402 498 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm22275-201ENSMUST00000122470 310 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm16357-201ENSMUST00000144091 474 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm16102-201ENSMUST00000160955 420 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm5656-201ENSMUST00000171020 1096 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm27037-201ENSMUST00000182270 960 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms