Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm11498-201ENSMUST00000120660 949 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm12369-201ENSMUST00000121343 942 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm18833-201ENSMUST00000173218 862 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm9529-201ENSMUST00000177598 579 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm19739-201ENSMUST00000195941 153 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 AV026068-218ENSMUST00000223980 575 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm12653-201ENSMUST00000117778 561 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm14755-201ENSMUST00000118037 384 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm13469-201ENSMUST00000118231 350 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm11472-201ENSMUST00000121305 556 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm14747-201ENSMUST00000149888 984 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm24369-201ENSMUST00000175387 96 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm21877-201ENSMUST00000185640 694 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Chmp6P0C0A3 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm11920-201ENSMUST00000118491 563 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm13438-201ENSMUST00000120100 573 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm8722-201ENSMUST00000121466 769 ntBASIC6.92□□□□□ -1.3
Chmp6P0C0A3 Gm8089-201ENSMUST00000122463 968 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms