Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Hoxd3P09027 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Hoxd3P09027 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Hoxd3P09027 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxd3P09027 Gm12661-201ENSMUST00000118780 3335 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm42899-201ENSMUST00000197034 2667 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm37200-201ENSMUST00000193689 2172 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Mir467h-201ENSMUST00000116759 121 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm14793-201ENSMUST00000118739 311 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm11901-201ENSMUST00000120412 437 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm25721-201ENSMUST00000157496 171 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm15849-201ENSMUST00000159257 335 ntTSL 3 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm16138-201ENSMUST00000159341 821 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm29577-201ENSMUST00000186427 693 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm6123-201ENSMUST00000193658 1069 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm37719-201ENSMUST00000194615 292 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm37341-201ENSMUST00000194680 371 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm9227-201ENSMUST00000194733 566 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm9632-201ENSMUST00000195934 643 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm44373-201ENSMUST00000196112 169 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm17835-201ENSMUST00000196870 499 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm44385-201ENSMUST00000198781 81 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm42489-201ENSMUST00000198964 669 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm44281-201ENSMUST00000203090 166 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm44274-201ENSMUST00000203417 256 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm7890-201ENSMUST00000204877 601 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm45171-201ENSMUST00000206360 736 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm18805-201ENSMUST00000206872 655 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm17991-201ENSMUST00000208139 297 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm45712-201ENSMUST00000212417 335 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm8512-201ENSMUST00000215367 471 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 AC153968.1-201ENSMUST00000215584 334 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm18631-201ENSMUST00000223125 1043 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxd3P09027 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxd3P09027 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxd3P09027 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.33□□□□□ -1.4
Hoxd3P09027 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms