Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Mir106b-201ENSMUST00000083580 82 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm16044-201ENSMUST00000118475 450 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm11553-201ENSMUST00000120682 240 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm6681-201ENSMUST00000205215 607 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm6070-201ENSMUST00000207275 419 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm9985-201ENSMUST00000044101 510 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lima1Q9ERG0 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm24869-201ENSMUST00000104072 128 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Mir6908-201ENSMUST00000184056 63 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm37103-201ENSMUST00000191830 115 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm18012-201ENSMUST00000204558 773 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm18838-201ENSMUST00000204855 886 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm7780-201ENSMUST00000214787 406 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm19007-201ENSMUST00000217746 874 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm46311-201ENSMUST00000217971 203 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms