Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Cdc40Q9DC48 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.02□□□□□ -1.44
Cdc40Q9DC48 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Cdc40Q9DC48 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Mir678-201ENSMUST00000102114 84 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm24888-201ENSMUST00000104387 130 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm11987-201ENSMUST00000118524 381 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm14018-201ENSMUST00000119042 455 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm5793-201ENSMUST00000119393 630 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm14614-201ENSMUST00000119873 384 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm12140-201ENSMUST00000121214 544 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm3140-201ENSMUST00000163523 481 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm28023-201ENSMUST00000184556 60 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm27825-201ENSMUST00000184586 60 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdc40Q9DC48 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm14733-201ENSMUST00000117680 133 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm11972-201ENSMUST00000118514 389 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm12101-201ENSMUST00000121590 390 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm4997-201ENSMUST00000154056 360 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms