Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Mir6999-201ENSMUST00000183498 61 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm44319-201ENSMUST00000196974 93 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm43906-201ENSMUST00000203194 906 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 AC134607.1-201ENSMUST00000214707 485 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 AC152946.3-201ENSMUST00000219424 280 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm21321-201ENSMUST00000220179 446 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gtf2a1Q99PM3 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm14513-201ENSMUST00000117403 123 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm15981-201ENSMUST00000119196 457 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm15153-201ENSMUST00000119867 274 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm11369-201ENSMUST00000120812 318 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm11257-201ENSMUST00000121313 315 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm24063-201ENSMUST00000157491 105 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm24039-201ENSMUST00000157878 132 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm4246-201ENSMUST00000172822 216 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm18552-201ENSMUST00000187425 538 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm28801-201ENSMUST00000188761 449 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm28164-201ENSMUST00000190143 442 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm42458-201ENSMUST00000201914 369 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm45255-201ENSMUST00000209943 811 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm18362-201ENSMUST00000221786 529 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 AC207128.1-201ENSMUST00000225928 799 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm10029-201ENSMUST00000089635 330 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Gtf2a1Q99PM3 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm15129-201ENSMUST00000119673 279 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm12322-201ENSMUST00000121605 389 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm15644-201ENSMUST00000121764 387 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm15989-201ENSMUST00000121895 498 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm14613-201ENSMUST00000122239 752 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm22763-201ENSMUST00000158374 107 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm25692-201ENSMUST00000175444 125 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm26269-201ENSMUST00000180144 126 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm1972-201ENSMUST00000181606 964 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm17828-201ENSMUST00000183380 799 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm27542-201ENSMUST00000184184 256 ntBASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.79□□□□□ -1.32
Gtf2a1Q99PM3 Gm28973-201ENSMUST00000189310 613 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms