Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RtcbQ99LF4 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.56□□□□□ -1.04
RtcbQ99LF4 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.56□□□□□ -1.04
RtcbQ99LF4 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Rnu11-201ENSMUST00000104135 134 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm14202-201ENSMUST00000120121 311 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm15300-201ENSMUST00000122324 279 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm23426-201ENSMUST00000122483 318 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm26424-201ENSMUST00000122530 104 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm26410-201ENSMUST00000157670 261 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm6921-201ENSMUST00000161478 435 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm3123-201ENSMUST00000163480 480 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm17048-201ENSMUST00000179266 847 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm28620-201ENSMUST00000190463 439 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm38097-201ENSMUST00000192936 439 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm44471-201ENSMUST00000197963 100 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm44243-201ENSMUST00000204323 692 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm18591-201ENSMUST00000220568 763 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm10205-201ENSMUST00000087431 234 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.55□□□□□ -1.04
RtcbQ99LF4 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
RtcbQ99LF4 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RtcbQ99LF4 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 AC169038.1-201ENSMUST00000227378 1352 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm11256-201ENSMUST00000118109 829 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm4910-201ENSMUST00000119605 366 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm7189-201ENSMUST00000119811 429 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm15502-201ENSMUST00000121449 208 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm24532-201ENSMUST00000157951 286 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm26000-201ENSMUST00000157991 107 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm16557-201ENSMUST00000159182 191 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm22701-201ENSMUST00000175371 291 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC8.54□□□□□ -1.04
RtcbQ99LF4 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RtcbQ99LF4 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms