Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm14623-201ENSMUST00000121398 603 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm24422-201ENSMUST00000157800 119 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm16138-201ENSMUST00000159341 821 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm2976-201ENSMUST00000160362 513 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm27156-201ENSMUST00000184589 754 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Mir7058-201ENSMUST00000184637 75 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm28356-202ENSMUST00000187566 858 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm42976-201ENSMUST00000200313 222 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm4374-201ENSMUST00000204929 424 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm44665-201ENSMUST00000205381 251 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC116589.4-201ENSMUST00000222390 216 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 CT010505.1-201ENSMUST00000227026 396 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm22053-201ENSMUST00000083394 200 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm15715-201ENSMUST00000118032 283 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm13930-201ENSMUST00000118569 368 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm11797-201ENSMUST00000121336 754 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm15242-201ENSMUST00000122459 283 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm24002-201ENSMUST00000158456 104 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm25713-201ENSMUST00000158625 109 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm27001-201ENSMUST00000182252 936 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm27178-201ENSMUST00000184962 340 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm29470-201ENSMUST00000188007 696 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC6.44□□□□□ -1.38
Clrn1Q8K445 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm19182-201ENSMUST00000207139 577 ntBASIC6.44□□□□□ -1.38
Clrn1Q8K445 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms