Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm8282-201ENSMUST00000187559 483 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm9127-201ENSMUST00000188041 985 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm44690-201ENSMUST00000207984 382 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm7351-201ENSMUST00000210745 580 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm46364-201ENSMUST00000218548 319 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Glycam1-204ENSMUST00000228895 641 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm24695-201ENSMUST00000083877 83 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Brf1Q8CFK2 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.16
Brf1Q8CFK2 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm26340-201ENSMUST00000102365 99 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm14116-201ENSMUST00000117733 805 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm13702-201ENSMUST00000118542 825 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm6654-201ENSMUST00000118950 348 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm29588-201ENSMUST00000185738 298 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm28438-201ENSMUST00000188299 345 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Trdv3-201ENSMUST00000198551 309 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm44603-201ENSMUST00000206820 367 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm18600-201ENSMUST00000207205 505 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm7588-201ENSMUST00000216866 571 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm9321-201ENSMUST00000221179 778 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm9472-201ENSMUST00000221625 526 ntBASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.77□□□□□ -1.17
Brf1Q8CFK2 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Brf1Q8CFK2 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms