Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm25760-201ENSMUST00000103989 132 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm13579-201ENSMUST00000118519 517 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm13482-201ENSMUST00000119842 254 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm12006-201ENSMUST00000120786 403 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm12639-201ENSMUST00000121400 493 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm24385-201ENSMUST00000122694 350 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm2735-201ENSMUST00000136133 277 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm22794-201ENSMUST00000157228 306 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm22158-201ENSMUST00000158411 126 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm23007-201ENSMUST00000158951 177 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm7420-201ENSMUST00000162836 842 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm5445-201ENSMUST00000180224 480 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm28580-201ENSMUST00000186767 88 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.52□□□□□ -0.89
Clcn1Q64347 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm37946-201ENSMUST00000192064 347 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm37382-201ENSMUST00000193032 1596 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm43768-201ENSMUST00000198380 1258 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm42883-201ENSMUST00000202594 222 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC9.52□□□□□ -0.89
Clcn1Q64347 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm4574-201ENSMUST00000207804 542 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm45100-201ENSMUST00000209153 391 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm6581-201ENSMUST00000214545 260 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 AC154250.1-201ENSMUST00000224775 489 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 AV026068-229ENSMUST00000225516 595 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Grik1-209ENSMUST00000227986 2942 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Glycam1-204ENSMUST00000228895 641 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Clcn1Q64347 n-R5s41-201ENSMUST00000083025 119 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm38099-201ENSMUST00000193280 3170 ntBASIC9.52□□□□□ -0.89
Clcn1Q64347 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Clcn1Q64347 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clcn1Q64347 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm18537-202ENSMUST00000206215 1503 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm37403-201ENSMUST00000193775 3521 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm17137-201ENSMUST00000164106 4371 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm22781-201ENSMUST00000104083 137 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm14380-201ENSMUST00000122298 431 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm23888-201ENSMUST00000122690 253 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm16362-201ENSMUST00000135189 214 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm24002-201ENSMUST00000158456 104 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm25640-201ENSMUST00000175378 125 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm26505-201ENSMUST00000176208 166 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm7804-202ENSMUST00000194187 854 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 AC160114.2-201ENSMUST00000223021 300 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 CT033778.1-201ENSMUST00000224767 767 ntBASIC9.51□□□□□ -0.89
Clcn1Q64347 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clcn1Q64347 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Clcn1Q64347 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms