Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm24709-201ENSMUST00000104123 132 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm23768-201ENSMUST00000104440 131 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm11198-201ENSMUST00000119771 974 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm10364-202ENSMUST00000153034 1001 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm22428-201ENSMUST00000158554 132 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm27186-201ENSMUST00000184223 307 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm7341-201ENSMUST00000192183 926 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm44258-201ENSMUST00000204925 301 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 AC174797.2-203ENSMUST00000224017 716 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 AC154727.1-201ENSMUST00000226537 499 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm18493-201ENSMUST00000192084 1612 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 AC159301.1-202ENSMUST00000225860 2133 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm11338-201ENSMUST00000120086 1160 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm13221-201ENSMUST00000121712 430 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm5401-201ENSMUST00000122444 365 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm26402-201ENSMUST00000158499 113 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm22945-201ENSMUST00000158557 157 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm7152-201ENSMUST00000163570 605 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm5611-201ENSMUST00000164523 852 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm21171-201ENSMUST00000180048 673 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm27156-201ENSMUST00000184589 754 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm28958-201ENSMUST00000185864 703 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm8004-201ENSMUST00000187782 617 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm43546-201ENSMUST00000196721 943 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 AC117240.1-201ENSMUST00000199436 61 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm42713-201ENSMUST00000202709 945 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm45136-201ENSMUST00000205793 943 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 CT025598.1-201ENSMUST00000225140 427 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 AC131068.1-201ENSMUST00000226891 482 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm37407-201ENSMUST00000194793 1316 ntBASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim41Q5NCC3 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim41Q5NCC3 Gm42701-201ENSMUST00000196117 1657 ntBASIC13.02□□□□□ -0.32
Trim41Q5NCC3 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim41Q5NCC3 Gm37121-201ENSMUST00000192219 2556 ntBASIC13.02□□□□□ -0.32
Trim41Q5NCC3 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim41Q5NCC3 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim41Q5NCC3 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 AC132474.1-201ENSMUST00000214407 3686 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm13815-201ENSMUST00000119963 412 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm23034-201ENSMUST00000158001 147 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm26455-201ENSMUST00000175300 92 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm43148-201ENSMUST00000198237 520 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm45100-201ENSMUST00000209153 391 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms