Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm6654-201ENSMUST00000118950 348 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm15349-201ENSMUST00000121154 204 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm21877-201ENSMUST00000185640 694 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm29464-201ENSMUST00000187692 513 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm38068-201ENSMUST00000192546 540 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm37511-201ENSMUST00000192901 294 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm8860-201ENSMUST00000193160 445 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trafd1Q3UDK1 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm16073-201ENSMUST00000116032 517 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm15596-201ENSMUST00000121139 784 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm24359-201ENSMUST00000158418 221 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm27295-201ENSMUST00000184264 153 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm43048-201ENSMUST00000196101 388 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trafd1Q3UDK1 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trafd1Q3UDK1 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trafd1Q3UDK1 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trafd1Q3UDK1 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.36□□□□□ -1.39
Trafd1Q3UDK1 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trafd1Q3UDK1 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trafd1Q3UDK1 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.36□□□□□ -1.39
Trafd1Q3UDK1 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms