Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm15967-201ENSMUST00000120027 1116 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm14908-201ENSMUST00000120930 1286 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm14038-201ENSMUST00000121500 807 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 Mir6361-201ENSMUST00000185079 101 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm9110-201ENSMUST00000219035 617 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 AC154431.2-201ENSMUST00000225215 1055 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 Olfr844-201ENSMUST00000054106 930 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Malat1-201ENSMUST00000172812 6983 ntBASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smarcc1P97496 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.35□□□□□ -1.07
Smarcc1P97496 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC8.34□□□□□ -1.07
Smarcc1P97496 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm27960-201ENSMUST00000183445 184 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm44312-201ENSMUST00000203536 469 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm44137-201ENSMUST00000203670 367 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 AC155941.1-201ENSMUST00000220223 529 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 AC113125.2-201ENSMUST00000226837 362 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.34□□□□□ -1.07
Smarcc1P97496 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smarcc1P97496 Gm10773-201ENSMUST00000218071 3935 ntBASIC8.34□□□□□ -1.08
Smarcc1P97496 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Smarcc1P97496 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Smarcc1P97496 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Smarcc1P97496 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Smarcc1P97496 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Smarcc1P97496 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm25317-201ENSMUST00000116824 129 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm13455-201ENSMUST00000118767 517 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm12565-201ENSMUST00000119004 649 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm24733-201ENSMUST00000158863 253 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm23343-201ENSMUST00000158964 143 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm7952-201ENSMUST00000180540 984 ntBASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smarcc1P97496 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms