Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim43cP86449 Gm37241-201ENSMUST00000191736 523 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm37866-201ENSMUST00000191950 696 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm34144-201ENSMUST00000197039 259 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm36448-201ENSMUST00000199916 438 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim43cP86449 Gm9419-201ENSMUST00000200672 567 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm19596-201ENSMUST00000203685 739 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim43cP86449 Gm44111-201ENSMUST00000204649 399 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim43cP86449 AC159819.1-201ENSMUST00000213911 328 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim43cP86449 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim43cP86449 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Trim43cP86449 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43cP86449 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim43cP86449 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Trim43cP86449 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43cP86449 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim43cP86449 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.41□□□□□ -1.22
Trim43cP86449 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43cP86449 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim43cP86449 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim43cP86449 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim43cP86449 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim43cP86449 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm23485-201ENSMUST00000104181 155 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm15310-201ENSMUST00000117891 372 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm14098-201ENSMUST00000119295 623 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm4911-201ENSMUST00000119388 945 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm14300-201ENSMUST00000120800 946 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.4□□□□□ -1.22
Trim43cP86449 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm28149-201ENSMUST00000187102 378 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm28917-201ENSMUST00000187294 237 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm21728-201ENSMUST00000188442 695 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm21889-201ENSMUST00000188487 695 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm28768-201ENSMUST00000189034 378 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20932-201ENSMUST00000189115 694 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm21920-201ENSMUST00000190042 695 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm43141-201ENSMUST00000199695 274 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm45379-201ENSMUST00000211772 549 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm4042-201ENSMUST00000216946 637 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm2398-201ENSMUST00000218347 883 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Gm35619-201ENSMUST00000222548 600 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 AC080021.1-201ENSMUST00000228104 700 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Mir350-201ENSMUST00000083639 99 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim43cP86449 Gm44897-201ENSMUST00000206187 1341 ntBASIC7.4□□□□□ -1.22
Trim43cP86449 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43cP86449 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Trim43cP86449 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Trim43cP86449 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.4□□□□□ -1.23
Trim43cP86449 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.23
Trim43cP86449 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.4□□□□□ -1.23
Trim43cP86449 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Trim43cP86449 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Trim43cP86449 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trim43cP86449 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.4□□□□□ -1.23
Trim43cP86449 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms