Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm22707-201ENSMUST00000103834 110 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm649-201ENSMUST00000117284 1054 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm24286-201ENSMUST00000157632 128 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm23855-201ENSMUST00000158377 135 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm8245-201ENSMUST00000182434 987 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm5058-201ENSMUST00000187331 463 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm28439-201ENSMUST00000187714 876 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm3841-201ENSMUST00000191399 451 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm44590-201ENSMUST00000206161 391 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm10126-201ENSMUST00000221732 168 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm6054-201ENSMUST00000078052 378 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC7.56□□□□□ -1.2
Hmgb1P63158 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hmgb1P63158 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hmgb1P63158 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Mir546-201ENSMUST00000102105 121 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm9439-201ENSMUST00000119554 973 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm15786-201ENSMUST00000121079 450 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm12630-201ENSMUST00000121575 784 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 BC064078-201ENSMUST00000122939 570 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm17907-201ENSMUST00000173150 710 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm18501-201ENSMUST00000185363 664 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm43147-201ENSMUST00000196944 542 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC7.55□□□□□ -1.2
Hmgb1P63158 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Hmgb1P63158 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hmgb1P63158 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.55□□□□□ -1.2
Hmgb1P63158 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Hmgb1P63158 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.54□□□□□ -1.2
Hmgb1P63158 AC127371.2-201ENSMUST00000228108 1933 ntBASIC7.54□□□□□ -1.2
Hmgb1P63158 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms