Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Mir674-201ENSMUST00000102421 100 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm24888-201ENSMUST00000104387 130 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm13877-201ENSMUST00000120614 417 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm6264-201ENSMUST00000160802 624 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx3P48381 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm36991-201ENSMUST00000191800 648 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm38291-201ENSMUST00000193671 259 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm21461-201ENSMUST00000200382 863 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm18012-201ENSMUST00000204558 773 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm18838-201ENSMUST00000204855 886 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm44279-201ENSMUST00000205154 472 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm7780-201ENSMUST00000214787 406 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm18040-201ENSMUST00000217922 827 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rfx3P48381 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.79□□□□□ -1.48
Rfx3P48381 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx3P48381 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm26146-201ENSMUST00000104478 185 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Gm2178-201ENSMUST00000104927 357 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm15621-201ENSMUST00000119162 364 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Gm12174-201ENSMUST00000119853 813 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Gm13338-201ENSMUST00000120235 361 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.78□□□□□ -1.48
Rfx3P48381 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm25057-201ENSMUST00000157366 88 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Rfx3P48381 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC5.78□□□□□ -1.48
Rfx3P48381 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm25617-201ENSMUST00000179548 133 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.78□□□□□ -1.48
Rfx3P48381 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm25617-202ENSMUST00000198387 132 ntBASIC5.78□□□□□ -1.48
Rfx3P48381 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.78□□□□□ -1.48
Rfx3P48381 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms