Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Rfx1P48377 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rfx1P48377 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rfx1P48377 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.33□□□□□ -1.08
Rfx1P48377 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC8.33□□□□□ -1.08
Rfx1P48377 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm12075-201ENSMUST00000117426 397 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm13930-201ENSMUST00000118569 368 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Rfx1P48377 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm26323-201ENSMUST00000157743 175 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm23117-201ENSMUST00000158482 108 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Mir1264-201ENSMUST00000175381 86 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm7678-201ENSMUST00000181879 943 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm29534-201ENSMUST00000187328 382 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm43848-201ENSMUST00000198060 1247 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC8.33□□□□□ -1.08
Rfx1P48377 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm8291-201ENSMUST00000209635 1261 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 AC153881.3-201ENSMUST00000218494 1561 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 AC156636.2-201ENSMUST00000218845 4557 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm8607-201ENSMUST00000221864 431 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rfx1P48377 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rfx1P48377 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rfx1P48377 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm24613-201ENSMUST00000083266 130 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Rfx1P48377 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 AC022682.2-202ENSMUST00000224394 3943 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm43523-201ENSMUST00000197397 2878 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rfx1P48377 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rfx1P48377 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.33□□□□□ -1.08
Rfx1P48377 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm37407-201ENSMUST00000194793 1316 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC8.32□□□□□ -1.08
Rfx1P48377 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rfx1P48377 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
Rfx1P48377 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Gm4911-201ENSMUST00000119388 945 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Gm9435-201ENSMUST00000120379 877 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Gm16248-201ENSMUST00000124238 243 ntBASIC8.32□□□□□ -1.08
Rfx1P48377 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.32□□□□□ -1.08
Rfx1P48377 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rfx1P48377 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rfx1P48377 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.32□□□□□ -1.08
Rfx1P48377 Gm2505-201ENSMUST00000200413 825 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms