Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 AC091783.1-201ENSMUST00000223614 1613 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
Usp4P35123 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Usp4P35123 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Mir697-201ENSMUST00000102316 109 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm24340-201ENSMUST00000104208 97 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC7.12□□□□□ -1.27
Usp4P35123 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm14388-201ENSMUST00000118119 477 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm12375-201ENSMUST00000119331 921 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm14531-201ENSMUST00000120845 285 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.12□□□□□ -1.27
Usp4P35123 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Gm5125-201ENSMUST00000148614 624 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm16260-201ENSMUST00000155141 304 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm24228-201ENSMUST00000158829 129 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.12□□□□□ -1.27
Usp4P35123 Gm23018-201ENSMUST00000177928 109 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm4956-202ENSMUST00000178869 672 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm27684-201ENSMUST00000183778 80 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Mir6337-201ENSMUST00000184194 105 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm27160-201ENSMUST00000184837 199 ntBASIC7.12□□□□□ -1.27
Usp4P35123 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Gm28614-201ENSMUST00000186483 458 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.12□□□□□ -1.27
Usp4P35123 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC7.12□□□□□ -1.27
Usp4P35123 Gm18747-201ENSMUST00000198129 648 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC7.12□□□□□ -1.27
Usp4P35123 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.12□□□□□ -1.27
Usp4P35123 Gm43967-201ENSMUST00000203787 301 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.12□□□□□ -1.27
Usp4P35123 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.12□□□□□ -1.27
Usp4P35123 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.12□□□□□ -1.27
Usp4P35123 AL929285.1-201ENSMUST00000215522 229 ntBASIC7.12□□□□□ -1.27
Usp4P35123 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.12□□□□□ -1.27
Usp4P35123 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.12□□□□□ -1.27
Usp4P35123 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.12□□□□□ -1.27
Usp4P35123 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.12□□□□□ -1.27
Usp4P35123 AC125464.1-201ENSMUST00000228013 512 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Gm5436-201ENSMUST00000058103 643 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Usp4P35123 Gm18066-201ENSMUST00000210904 1774 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Usp4P35123 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Usp4P35123 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.12□□□□□ -1.27
Usp4P35123 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.12□□□□□ -1.27
Usp4P35123 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp4P35123 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.11□□□□□ -1.27
Usp4P35123 Mup-ps14-201ENSMUST00000118437 532 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mup-ps10-201ENSMUST00000119626 556 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm7746-201ENSMUST00000120966 503 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gm23897-201ENSMUST00000158110 158 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm24057-201ENSMUST00000158616 302 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm6264-201ENSMUST00000160802 624 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm2619-202ENSMUST00000166777 651 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm3208-201ENSMUST00000168281 427 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-7-201ENSMUST00000180364 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Usp4P35123 Mir6357-201ENSMUST00000184246 104 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms