Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col2a1P28481 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm8872-201ENSMUST00000197475 1341 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.23□□□□□ -1.25
Col2a1P28481 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Mir678-201ENSMUST00000102114 84 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm9428-201ENSMUST00000127214 769 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm22599-201ENSMUST00000157597 132 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm24395-201ENSMUST00000158139 125 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm9597-201ENSMUST00000171913 602 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Mir5112-201ENSMUST00000174897 60 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm2539-203ENSMUST00000181352 746 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm29650-201ENSMUST00000188485 742 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm28443-201ENSMUST00000189081 698 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm10095-201ENSMUST00000222765 483 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 Gm36262-201ENSMUST00000223274 499 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.23□□□□□ -1.25
Col2a1P28481 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col2a1P28481 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Col2a1P28481 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm26067-201ENSMUST00000103789 110 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Gm13811-201ENSMUST00000117800 256 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Gm14331-201ENSMUST00000120396 409 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC7.22□□□□□ -1.25
Col2a1P28481 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm27854-201ENSMUST00000175578 244 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.22□□□□□ -1.25
Col2a1P28481 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm28934-201ENSMUST00000186491 346 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.22□□□□□ -1.25
Col2a1P28481 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm5318-201ENSMUST00000205249 406 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col2a1P28481 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Col2a1P28481 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Col2a1P28481 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col2a1P28481 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col2a1P28481 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC7.22□□□□□ -1.25
Col2a1P28481 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col2a1P28481 Gm37186-201ENSMUST00000195629 2861 ntBASIC7.21□□□□□ -1.25
Col2a1P28481 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Col2a1P28481 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.21□□□□□ -1.25
Col2a1P28481 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.25
Col2a1P28481 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col2a1P28481 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.21□□□□□ -1.26
Col2a1P28481 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Gm22372-201ENSMUST00000104589 136 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm13493-201ENSMUST00000120318 493 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm15959-201ENSMUST00000121724 368 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm14237-201ENSMUST00000122080 430 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Mir1907-201ENSMUST00000122509 90 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm23757-201ENSMUST00000158353 100 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm44768-201ENSMUST00000205719 393 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm19182-201ENSMUST00000207139 577 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.21□□□□□ -1.26
Col2a1P28481 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Col2a1P28481 Gm23456-201ENSMUST00000083335 137 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms