Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a2P25318 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.3□□□□□ -1.56
Col8a2P25318 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.3□□□□□ -1.56
Col8a2P25318 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a2P25318 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a2P25318 AC154806.2-201ENSMUST00000227212 2385 ntBASIC5.3□□□□□ -1.56
Col8a2P25318 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.3□□□□□ -1.56
Col8a2P25318 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col8a2P25318 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a2P25318 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a2P25318 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.3□□□□□ -1.56
Col8a2P25318 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a2P25318 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a2P25318 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.3□□□□□ -1.56
Col8a2P25318 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col8a2P25318 Gm38070-201ENSMUST00000191850 6480 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm6446-201ENSMUST00000120604 818 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.29□□□□□ -1.56
Col8a2P25318 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm23896-201ENSMUST00000158109 130 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Gm4152-201ENSMUST00000172675 259 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm29160-201ENSMUST00000190094 699 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm37511-201ENSMUST00000192901 294 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.29□□□□□ -1.56
Col8a2P25318 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Gm43033-201ENSMUST00000199682 425 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 BC049739-201ENSMUST00000202626 660 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col8a2P25318 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm45473-201ENSMUST00000211452 616 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Gm5055-201ENSMUST00000215697 581 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.29□□□□□ -1.56
Col8a2P25318 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Col8a2P25318 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Col8a2P25318 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm25515-201ENSMUST00000083858 157 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.29□□□□□ -1.56
Col8a2P25318 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a2P25318 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm43314-201ENSMUST00000196744 2231 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col8a2P25318 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col8a2P25318 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a2P25318 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a2P25318 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col8a2P25318 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm24989-201ENSMUST00000104461 88 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm15016-201ENSMUST00000117300 720 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Gm11318-201ENSMUST00000118640 961 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Gm14580-201ENSMUST00000119122 718 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Gm16074-201ENSMUST00000119524 444 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a2P25318 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm25904-201ENSMUST00000158491 143 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a2P25318 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col8a2P25318 Gm37430-201ENSMUST00000193039 196 ntBASIC5.28□□□□□ -1.56
Col8a2P25318 Gm37463-201ENSMUST00000193819 796 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms