Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Sdc1P18828 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm11864-201ENSMUST00000116179 1220 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm9439-201ENSMUST00000119554 973 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC5.11□□□□□ -1.59
Sdc1P18828 Mir1962-201ENSMUST00000157516 121 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm24239-201ENSMUST00000157791 255 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Mir1929-201ENSMUST00000158635 93 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm9064-201ENSMUST00000163579 566 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm8696-201ENSMUST00000174777 385 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm18953-201ENSMUST00000175694 300 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm26587-201ENSMUST00000180795 989 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Mir7084-201ENSMUST00000183876 70 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm43048-201ENSMUST00000196101 388 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm9057-201ENSMUST00000198791 296 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm36378-201ENSMUST00000201709 388 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm17611-202ENSMUST00000220613 814 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 AC124686.1-201ENSMUST00000225546 522 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sdc1P18828 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm4825-201ENSMUST00000079690 408 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gm10705-201ENSMUST00000098980 461 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm10259-201ENSMUST00000091289 1590 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sdc1P18828 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.11□□□□□ -1.59
Sdc1P18828 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.11□□□□□ -1.59
Sdc1P18828 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sdc1P18828 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Mir705-201ENSMUST00000102058 82 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm22707-201ENSMUST00000103834 110 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm7803-201ENSMUST00000117176 1015 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm13983-201ENSMUST00000118018 865 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm15149-201ENSMUST00000119370 360 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm13991-201ENSMUST00000120190 648 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC5.1□□□□□ -1.59
Sdc1P18828 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Sdc1P18828 Mir6348-201ENSMUST00000183804 120 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm28677-202ENSMUST00000186904 615 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC5.1□□□□□ -1.59
Sdc1P18828 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm35323-201ENSMUST00000191836 499 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm18698-201ENSMUST00000192327 668 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm43141-201ENSMUST00000199695 274 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm4032-201ENSMUST00000210886 487 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms