Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdx1P18111 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm18830-201ENSMUST00000199036 1396 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 CT025639.1-201ENSMUST00000223906 1375 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm37891-201ENSMUST00000195585 1326 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Cdx1P18111 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm15484-201ENSMUST00000118871 828 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm15188-201ENSMUST00000121264 704 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm12005-201ENSMUST00000121451 379 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm22533-201ENSMUST00000158821 274 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm6264-201ENSMUST00000160802 624 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm17786-201ENSMUST00000182000 427 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm18501-201ENSMUST00000185363 664 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm19124-201ENSMUST00000191041 832 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm17833-201ENSMUST00000197629 1065 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm45157-201ENSMUST00000208729 401 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm18586-201ENSMUST00000217265 518 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 AC133948.2-201ENSMUST00000217850 378 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm31711-201ENSMUST00000220687 196 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 AC163684.1-201ENSMUST00000223766 927 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdx1P18111 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdx1P18111 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdx1P18111 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm23054-201ENSMUST00000082804 162 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdx1P18111 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdx1P18111 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdx1P18111 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Cdx1P18111 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.3□□□□□ -1.56
Cdx1P18111 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms