Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Lire1P11260 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Robo2-210ENSMUST00000226478 8059 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lire1P11260 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm25877-201ENSMUST00000104326 129 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm24989-201ENSMUST00000104461 88 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm5752-201ENSMUST00000117771 594 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm12944-201ENSMUST00000119262 463 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm11850-201ENSMUST00000119679 479 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm12174-201ENSMUST00000119853 813 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm16357-201ENSMUST00000144091 474 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.42□□□□□ -1.38
Lire1P11260 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Gm27218-201ENSMUST00000183745 392 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm29156-201ENSMUST00000187764 499 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm4322-201ENSMUST00000191094 336 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm8101-201ENSMUST00000192796 478 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Gm44213-201ENSMUST00000204977 703 ntBASIC6.42□□□□□ -1.38
Lire1P11260 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Gm45432-201ENSMUST00000210391 416 ntBASIC6.42□□□□□ -1.38
Lire1P11260 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.42□□□□□ -1.38
Lire1P11260 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Lire1P11260 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.42□□□□□ -1.38
Lire1P11260 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.42□□□□□ -1.38
Lire1P11260 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Gm5436-201ENSMUST00000058103 643 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm24036-201ENSMUST00000082868 156 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Lire1P11260 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lire1P11260 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.42□□□□□ -1.38
Lire1P11260 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lire1P11260 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Lire1P11260 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Lire1P11260 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Lire1P11260 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.41□□□□□ -1.38
Lire1P11260 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm15644-201ENSMUST00000121764 387 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.41□□□□□ -1.38
Lire1P11260 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm24157-201ENSMUST00000175265 111 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Gm25617-201ENSMUST00000179548 133 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm25617-202ENSMUST00000198387 132 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Gm44463-201ENSMUST00000198895 137 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm43849-201ENSMUST00000201086 215 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms