Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm15105-201ENSMUST00000117777 204 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm15621-201ENSMUST00000119162 364 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm11925-201ENSMUST00000121375 535 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm9697-201ENSMUST00000147052 997 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm9672-201ENSMUST00000166437 425 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm27026-201ENSMUST00000183003 892 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC5.13□□□□□ -1.59
Hmgb3O54879 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm37103-201ENSMUST00000191830 115 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm37966-201ENSMUST00000193122 326 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm8539-201ENSMUST00000199822 501 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm44582-201ENSMUST00000209125 445 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gcnt2-204ENSMUST00000223570 335 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm24046-201ENSMUST00000083111 165 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Hmgb3O54879 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm26645-201ENSMUST00000181076 1316 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm6877-201ENSMUST00000119347 1101 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm13900-201ENSMUST00000119402 498 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm14048-201ENSMUST00000121864 1268 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm16357-201ENSMUST00000144091 474 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm9064-201ENSMUST00000163579 566 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm17121-201ENSMUST00000170414 847 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm26179-201ENSMUST00000177723 132 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm24923-201ENSMUST00000178201 88 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm17222-201ENSMUST00000180135 847 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm26587-201ENSMUST00000180795 989 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Mir6922-201ENSMUST00000185099 66 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm37585-201ENSMUST00000195440 280 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm44265-201ENSMUST00000203631 465 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm20274-201ENSMUST00000206967 584 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm8290-201ENSMUST00000218202 477 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm18628-201ENSMUST00000220584 475 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Mir296-201ENSMUST00000083587 79 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms