Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm7648-201ENSMUST00000173036 1658 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm37429-201ENSMUST00000193807 1799 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm6181-201ENSMUST00000117187 264 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm11198-201ENSMUST00000119771 974 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm12288-201ENSMUST00000121054 1282 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm16359-201ENSMUST00000124511 289 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm2709-201ENSMUST00000142979 350 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm27960-201ENSMUST00000183445 184 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm42619-201ENSMUST00000197564 1136 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm42824-201ENSMUST00000199361 247 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm43501-201ENSMUST00000202513 107 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm7499-201ENSMUST00000210423 813 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 AC122035.2-201ENSMUST00000228698 462 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm23456-201ENSMUST00000083335 137 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Gm42455-201ENSMUST00000199761 2736 ntBASIC8.44□□□□□ -1.06
NpcdF8VQB8 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
NpcdF8VQB8 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 BC055308-201ENSMUST00000193380 2538 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm42615-201ENSMUST00000197704 1820 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm22194-201ENSMUST00000116869 95 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm12842-201ENSMUST00000117298 476 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm15765-201ENSMUST00000118407 910 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm15754-201ENSMUST00000119191 478 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm12438-201ENSMUST00000122034 336 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm3140-201ENSMUST00000163523 481 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm17048-201ENSMUST00000179266 847 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms